Capstone — Integrated Glycomics/Glycoproteomics Project — Hands-on

Apply everything learned across glycomics and glycoproteomics modules in a guided, end-to-end capstone. You will take curated RAW files and processed tables through QC, identification review, quantitative summaries, biological interpretation and FAIR-style reporting to deliver a coherent mini-project suitable for slides, manuscripts or stakeholder review.

Capstone — Integrated Glycomics/Glycoproteomics Project

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Session Index

Session 1 — Project Design & Dataset Onboarding Session 2 — Processing, QC & Quantitative Views Session 3 — Integration, Statistics & Biology Session 4 — Final Report, Slides & Submission Bundle

Session 1

Fee: Rs 8800

Project Design & Dataset Onboarding

Define biological question, cohorts and readouts

disease, bioprocess or therapeutic context sample groups and comparisons primary and secondary endpoints

Organize RAW files, IDs and quant tables

released glycans and glycopeptides lectin arrays / microarrays if present sample and run mapping sheets

Capstone workspace and tooling

spreadsheet + R/Python notebooks directory layout for data and figures versioning and backup basics

Session 2

Fee: Rs 11800

Processing, QC & Quantitative Views

Review identifications and library matches

glycan and glycopeptide ID confidence FDR thresholds and filters resolving ambiguous compositions

QC for runs, features and samples

missingness, intensity ranges and outliers technical replicate checks basic normalization and scaling

First-pass quantitative summaries

composition profiles per group site occupancy and microheterogeneity views lectin / array signal summaries if applicable

Session 3

Fee: Rs 14800

Integration, Statistics & Biology

Statistical comparisons and feature selection

group tests for glycan / glycopeptide features multiple testing control where needed effect sizes and confidence intervals

Integrating glycan, glycopeptide and other readouts

aligning features across workflows linking to proteins, pathways or processes simple multivariate views (PCA/heatmaps)

Translating patterns into biological narratives

highlighting key motifs and sites tying signatures to mechanisms or CQAs limitations, caveats and next experiments

Session 4

Fee: Rs 18800

Final Report, Slides & Submission Bundle

Assemble figures, tables and key results

plots for compositions, sites and signatures

Draft a short, publication-style project report

background, methods and results sections one-page slide deck for presentation clear take-home messages

Capstone deliverables and FAIR-style bundle

data & metadata spreadsheets exportable figures and slide deck README and methods / limitations note

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Capstone — Integrated Glycomics/Glycoproteomics Project Training | End-to-End Mini Project

Capstone — Integrated Glycomics/Glycoproteomics Project — Hands-on