Clinical NGS Workflows & Lab Informatics (LIMS) — Hands-on

Operationalize the clinical NGS pipeline with robust lab informatics. This module focuses on sample-to-result execution: accessioning, barcoding, plate maps, LIMS/LIS configuration, QC checkpoints, data provenance, and regulated interfaces to EHR/LIS using HL7/FHIR. Learn how to design workflows that pass audits, preserve traceability, and scale from pilot to production.

Clinical NGS Workflows & Lab Informatics (LIMS)

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Session Index Category 5 · Clinical & Translational Bioinformatics

Session 1 — Accessioning, Barcoding & Pre-Analytics Session 2 — Wet-to-Dry Workflow & QC Handoffs Session 3 — LIMS Design: Entities, Rules & Validation Session 4 — Compliance, Interfaces & Operations

Session 1

Fee: Rs 12920

Accessioning, Barcoding & Pre-Analytics

Case intake & chain-of-custody

requisitions & consent accession IDs & UDI specimen triage

Barcodes, plate maps & batching

1D/2D barcodes 96/384 well layouts process controls

Pre-analytics & QC checkpoints

FFPE/fresh tissues cfDNA & germline spec acceptance rules

Session 2

Fee: Rs 17120

Wet-to-Dry Workflow & QC Handoffs

Wet lab orchestration

library prep & pooling instrument runs run QC & release

Dry lab handoffs & provenance

file naming & manifests checksum & audit trails QC metrics to LIMS

Exception handling

reruns & rescue logic non-conformances (NC) CAPA workflows

Session 3

Fee: Rs 21320

LIMS Design: Entities, Rules & Validation

Core data model & entities

patients/cases/specimens plates/runs/artifacts roles & permissions

Business rules & automation

status engines QC gates & sign-offs alerts & escalations

Validation & change control

IQ/OQ/PQ SOPs & versioning release management

Session 4

Fee: Rs 26920

Compliance, Interfaces & Operations

Regulatory & quality systems

CLIA/CAP checklists audit readiness data retention

Interfaces & interoperability

HL7 v2 / FHIR EHR/LIS integration instrument drivers

Secure operations & scaling

RBAC & audit logs SLA/throughput planning disaster recovery

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Clinical NGS Workflows & Lab Informatics (LIMS) | Accessioning, QC, LIMS/LIS, HL7/FHIR

Clinical NGS Workflows & Lab Informatics (LIMS) — Hands-on