Databases & Standards — GlyGen UniCarbKB & MIRAGE — Hands-on

Get fluent with the key databases, standards and reporting practices that power modern glycomics and glycoproteomics. This module focuses on GlyGen, UniCarbKB and related resources, MIRAGE guidelines, basic glyco formats and how to turn your glycan identifications and quantitation tables into FAIR, reusable datasets.

Databases & Standards — GlyGen UniCarbKB & MIRAGE

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Session Index

Session 1 — Glycan Databases Landscape & Data Models Session 2 — Using GlyGen, UniCarbKB & GlyTouCan Session 3 — MIRAGE Guidelines & Metadata Standards Session 4 — Mini Capstone: FAIR Glycomics Submission Pack

Session 1

Fee: Rs 8800

Glycan Databases Landscape & Data Models

Why we need standards and curated glycan resources

reproducibility cross study comparison FAIR principles

Overview of major glyco resources

GlyGen UniCarbKB GlyTouCan and related portals

Data models and identifiers for glycans and glycoproteins

accessions and stable IDs structure encodings overview linking to proteins and genes

Session 2

Fee: Rs 11800

Using GlyGen, UniCarbKB & GlyTouCan

GlyGen portal hands on

searching glycans and glycoproteins filters and advanced queries downloading annotation tables

UniCarbKB and experimental evidence

linking structures to MS data evidence levels overview interpreting spectrum annotation

Working with GlyTouCan IDs

ID lookup and registration concept connecting IDs to structures using IDs in analysis pipelines

Session 3

Fee: Rs 14800

MIRAGE Guidelines & Metadata Standards

What MIRAGE covers in glycomics experiments

sample preparation instrument setup data processing and reporting

Designing MIRAGE ready spreadsheets and templates

required vs optional fields controlled vocabularies linking to raw files and spectra

Connecting MIRAGE, databases and identifiers

using stable IDs in reports cross referencing GlyGen and UniCarbKB supporting downstream re analysis

Session 4

Fee: Rs 18800

Mini Capstone: FAIR Glycomics Submission Pack

Build a MIRAGE style metadata sheet for a glycomics experiment

from raw files to annotated tables

Annotate glycans with database identifiers

GlyTouCan IDs GlyGen and UniCarbKB links cross references to proteins

Deliverables: submission ready package

metadata and identification sheets database annotated glycan list short methods and data note

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Databases & Standards — GlyGen UniCarbKB & MIRAGE Training | Glycomics Resources & FAIR Data

Databases & Standards — GlyGen UniCarbKB & MIRAGE — Hands-on