Loading Video...
NTHRYS
Arrow

Integrative Structural Biology — CryoX EM NMR SAXS Training | Hybrid Modeling & Multi-Modal Data

NTHRYS >> Services >> Academic Services >> Training Programs >> Bioinformatics Training >> Proteomics, Structural Bioinformatics & Biophysical Modeling >> Integrative Structural Biology — CryoX EM NMR SAXS Training | Hybrid Modeling & Multi-Modal Data

Integrative Structural Biology — CryoX EM NMR SAXS — Hands-on

Learn how to integrate Cryo-EM, X-ray crystallography, NMR and SAXS data into coherent structural biology workflows. From interpreting maps and restraints to building, refining and validating hybrid models, you will design integrative structural studies that leverage multiple experimental modalities for reliable, publication-ready insights into macromolecular assemblies.

Integrative Structural Biology — CryoX EM NMR SAXS
Help Desk · WhatsApp
Session 1
Fee: Rs 12320
Modalities, Data Types & Resolutions
  • Cryo-EM, X-ray, NMR & SAXS in one view
  • what each technique measures resolution regimes and limits when to combine vs use alone
  • Core data formats and metadata concepts
  • maps, structure factors and restraints ideas NOE, RDC and other NMR observables (concepts) SAXS curves, q range and Guinier views
  • Experimental design for integrative studies
  • choosing complementary techniques sample considerations for each method planning for downstream modeling
Session 2
Fee: Rs 16520
Model Building & Refinement per Modality
  • X-ray crystallography model workflows (concepts)
  • electron density interpretation ideas refinement, R factors and B factors ligand and solvent modeling basics
  • Cryo-EM map fitting and refinement views
  • rigid body and flexible fitting ideas local resolution and filtering awareness map vs model consistency checks
  • NMR & SAXS guided modeling
  • using restraints and ensembles (concepts) fitting SAXS curves with models flexible and multi domain systems views
Session 3
Fee: Rs 20720
Hybrid / Integrative Modeling Workflows
  • Combining multiple restraints and data sources
  • maps, distances, crosslinks and SAXS together weighting and scoring ideas sampling conformational space concepts
  • Assemblies, complexes and flexible regions
  • multi chain and multi domain assemblies dealing with missing density or mobility coarse grained vs atomistic representations
  • Workflow patterns for integrative modeling
  • from input data to ranked models ensembles, clustering and representative states handoffs to MD and docking projects
Session 4
Fee: Rs 26320
Validation, Deposition & Reporting
  • Validation metrics for integrative models
  • geometry checks and stereochemistry fit to data and cross validation concepts model confidence and uncertainty summaries
  • Deposition standards and archives (concepts)
  • PDB, EMDB and related resources integrative / hybrid model deposition ideas metadata and annotation expectations
  • Figures, tables and stories for manuscripts & collaborators
  • multi modality figure panels cartoons, density overlays and SAXS fits clear model provenance and workflow diagrams


PDF