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LC–MS & MS/MS for Glycan Profiling Training | HILIC Methods, Fragmentation & QC Workflows

NTHRYS >> Services >> Academic Services >> Training Programs >> Bioinformatics Training >> Glycomics, Glycoproteomics & Structural Carbohydrate Analysis >> LC–MS & MS/MS for Glycan Profiling Training | HILIC Methods, Fragmentation & QC Workflows

LC–MS and MS/MS for Glycan Profiling — Hands-on

Learn how to design and execute liquid chromatography–mass spectrometry workflows tailored for glycan analysis. This module walks through LC method selection, gradient design, MS and MS/MS acquisition strategies and basic QC checks for confident glycan profiling in research and biopharma labs.

LC–MS and MS/MS for Glycan Profiling
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Session 1
Fee: Rs 8800
LC–MS Fundamentals for Glycans
  • Instrument components and ionization basics
  • LC modules and pumps ESI source overview quadrupole and TOF concepts
  • Ions, adducts and charge states for glycans
  • protonated and sodiated species label dependent behavior in source decay awareness
  • Key LC–MS parameters and system suitability
  • flow rate and injection volume source temperature and voltages test mixes and performance checks
Session 2
Fee: Rs 11800
Chromatographic Methods and Gradients
  • Column chemistries for glycan separations
  • HILIC columns RP and mixed mode options particle size and dimensions
  • Mobile phases, buffers and additives
  • organic solvent choices pH and buffer systems MS friendly additives
  • Gradient design, run time and carry over control
  • shallow vs steep gradients wash and re equilibration steps blank and carry over checks
Session 3
Fee: Rs 14800
MS/MS Fragmentation and Data Acquisition
  • MS1 acquisition and scan strategies
  • full scan settings resolution and scan speed dynamic range considerations
  • Fragmentation methods for glycans
  • CID and HCD basics B/Y and cross ring ions label dependent patterns
  • DDA and targeted acquisition for glycans
  • top N methods and exclusion lists targeted MS/MS of known species basic DIA concepts for glycomics
Session 4
Fee: Rs 18800
Mini Capstone: Glycan LC–MS Profiling Workflow
  • Designing an LC–MS method for a glycan panel
  • Theory plus Practical
  • Running standards and real samples with QC
  • system suitability criteria retention time tracking signal quality checks
  • Deliverables: method sheet, run log and raw data overview
  • PDF or DOC method description run sequence table basic chromatogram snapshots


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