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Model Calibration, Uncertainty & Global Sensitivity Training | Parameter Estimation & UQ

NTHRYS >> Services >> Academic Services >> Training Programs >> Bioinformatics Training >> Systems Biology, Network Medicine & Pathway Modeling >> Model Calibration, Uncertainty & Global Sensitivity Training | Parameter Estimation & UQ

Model Calibration, Uncertainty & Global Sensitivity — Hands-on

Learn how to turn qualitative fits into quantitatively calibrated and stress tested systems models. This module walks through parameter estimation workflows, uncertainty quantification and global sensitivity analysis so that you can defend model predictions and focus on parameters and mechanisms that truly matter.

Model Calibration, Uncertainty & Global Sensitivity
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Session 1
Fee: Rs 8800
Parameter Estimation & Calibration Basics
  • Error models and objective functions for calibration
  • least squares and likelihood views measurement noise assumptions cost surfaces and minima intuition
  • Local optimisation and gradient based methods
  • Levenberg Marquardt style ideas handling bounds and constraints practical convergence diagnostics
  • Good practices for calibration experiments and data use
  • separation of training and validation data scaling and normalisation of readouts simple residual and fit checks
Session 2
Fee: Rs 11800
Bayesian Calibration & Identifiability
  • Bayesian view of parameter estimation
  • priors likelihood and posteriors credible intervals for parameters prediction intervals vs fits
  • MCMC and sampling concepts for calibration
  • random walk and adaptive schemes burn in mixing and diagnostics posterior summaries and plots
  • Structural and practical identifiability basics
  • non identifiable parameter combinations profile likelihood style thinking design hints to improve identifiability
Session 3
Fee: Rs 14800
Uncertainty Quantification & Global Sensitivity
  • Sources and types of uncertainty in systems models
  • parameter and structural uncertainty observation and process noise scenario and input uncertainty
  • Sampling based uncertainty propagation
  • Latin hypercube and Monte Carlo ideas prediction bands and fan plots communicating uncertainty clearly
  • Global sensitivity: screening and variance based methods
  • Morris screening concepts Sobol indices intuition linking sensitivity to design choices
Session 4
Fee: Rs 18800
Mini Capstone: Calibrated & Stress Tested Model
  • Select a small systems model and data set for calibration
  • Theory + Practical
  • Calibrate parameters and map uncertainty and sensitivity
  • run basic optimisation or sampling generate prediction intervals compute simple global sensitivity indices
  • Deliverables: calibrated model, UQ plots and sensitivity summary
  • SBML or notebook implementation tables of parameter and sensitivity metrics short interpretation and limitations note


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