Gene Prediction Research Outsourcing Services
Our gene prediction research outsourcing services deliver high-accuracy annotations and coding sequence identification in newly sequenced genomes, supporting functional genomics, comparative genomics, and transcriptomics projects.
Our Gene Prediction Research Capabilities
Our bioinformaticians and computational biologists integrate de novo prediction tools, homology-based methods, transcript evidence, and machine learning to deliver robust gene models for diverse organisms.
Types of Gene Prediction Research We Handle
- De Novo Gene Prediction
- Homology-Based Gene Finding
- Ab Initio Gene Prediction
- Combined Evidence-Based Prediction
- Protein Coding Region Identification
- Intron-Exon Boundary Mapping
- Alternative Splicing Site Prediction
- UTR Annotation
- ORF (Open Reading Frame) Detection
- Gene Structure Refinement
- Non-Coding RNA Gene Prediction
- Pseudogene Detection
- Small Gene Prediction (Micropeptides)
- Genome Re-Annotation Projects
- Evidence-Based Transcript Validation
- Phylogenetic Gene Conservation Analysis
- Comparative Genomics Prediction
- Gene Family Identification
- Regulatory Element Prediction
- Promoter Region Mapping
- Enhancer and Silencer Prediction
- Prediction of Gene Clusters
- Horizontal Gene Transfer Analysis
- Transposable Element Annotation
- Virus Gene Prediction
- Pathogen Genome Gene Finding
- Plant and Animal Genome Annotation
- Microbial Genome Gene Prediction
- Regulatory-Ready Prediction Reports
- Custom Gene Prediction Pipelines
Key Research Outsourcing Services Offered
- Raw Sequence QC and Assembly Checks
- De Novo Gene Prediction Tools Setup
- Homology Search and BLAST Analysis
- Transcript Alignment Integration
- Evidence-Based Gene Model Refinement
- Intron-Exon Structure Validation
- Alternative Splicing Event Detection
- UTR and ORF Annotation
- Non-Coding RNA Identification
- Protein Domain Integration
- Regulatory Region Mapping
- Promoter and Enhancer Analysis
- Transposable Element Filtering
- Pseudogene Filtering
- Comparative Genomics Integration
- Phylogenetic Conservation Checks
- Automated Gene Prediction Pipelines
- Custom Scripting and Pipeline Development
- Data QC and Report Generation
- Regulatory-Compliant Annotation Reports
- Confidential Data Handling and NDA
- Interim Progress Reports
- Stakeholder Presentation Preparation
- Publication-Ready Figures and Tables
- Training on Gene Prediction Pipelines
- Workshops for Annotation Teams
- Post-Project Bioinformatics Support
- Grant and Manuscript Support
- Patent Drafting Assistance
- Long-Term Genome Annotation Partnerships
Why Choose Us for Gene Prediction Research Outsourcing?
Our gene prediction teams deliver robust, reproducible gene models that enable downstream functional genomics, comparative studies, and new target discovery with audit-ready annotation datasets.
Industries & Sectors We Serve
- Genomics R&D Companies
- Biotechnology and Pharma Units
- Academic Genome Annotation Labs
- Plant and Animal Breeding Institutes
- Pathogen Surveillance Research Centers
- Regulatory and Compliance Agencies
Customized Gene Prediction Solutions
We design pipelines integrating multiple prediction tools and transcript evidence, fine-tuned for your species, assembly quality, and functional objectives.
Quality Assurance & Regulatory Compliance
Our gene prediction pipelines comply with ISO, GxP, and bioinformatics best practices to deliver reproducible, audit-ready annotation and gene model reports.
Case Studies & Client Success Stories
See how our gene prediction services have enabled accurate genome annotations, novel gene discovery, and comparative genomic insights across various taxa. References available on request.
How It Works: Our Research Outsourcing Process
- Requirement Gathering: Define genome assembly, species, and annotation goals.
- Proposal & Quotation: Provide tool plan, pipeline outline, and cost estimate.
- Bioinformatics Execution: Run predictions, evidence integration, and gene model refinement.
- Data Reporting: Deliver annotated gene sets, GFF/GTF files, and compliance reports.
- Post-Project Support: Provide data interpretation, integration, and publication assistance.
Frequently Asked Questions (FAQs)
Q: Do you handle de novo and homology prediction?
A: Yes — we integrate both to increase prediction accuracy.
Q: Can you annotate entire eukaryotic genomes?
A: Absolutely — we specialize in complex genome annotations for plants, animals, and microbes.
Q: How secure is my genome data?
A: NDAs, secure servers, and controlled HPC access ensure total data confidentiality.
Get Started / Request a Quote
Contact us today to discuss your gene prediction research project and receive a tailored pipeline, timeline, and cost estimate aligned with your study goals.
Contact Us
Email: research-outsourcing@nthrys.com
Phone: +91-8977624748
Contact Us