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Environmental Bioinformatics Workshops

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Showing 13–24 of 50 categories
BLAST Database Searching Environmental Genomics
Beginner to intermediate training on using BLAST and similar homology search tools to identify environmental sequences against genomic databases.
3+WORKSHOPS
PROGRAMMES
Optimizing BLAST Query Parameters for Metagenomic Analysis Custom BLAST Database Construction from Environmental Genomes High-Throughput BLAST Screening for Environmental Microbial Communities +2 more programmes
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Microbial Community Statistical Analysis
Advanced training in statistical methods and R programming for analyzing alpha diversity, beta diversity, and community composition in environmental samples.
3+WORKSHOPS
PROGRAMMES
16S rRNA Amplicon Sequencing Data Processing Alpha and Beta Diversity Metrics Interpretation Metagenomics Assembly and Functional Annotation +2 more programmes
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Contamination Detection Environmental Samples
Technical certification for laboratory technicians on identifying and managing contamination in environmental DNA extraction and sequencing workflows.
3+WORKSHOPS
PROGRAMMES
Metagenomic Analysis for Microbial Contamination Profiling Biomarker Discovery in Contaminated Environmental Matrices Real-time PCR and qPCR Data Analysis for Pathogen Detection +2 more programmes
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Bioinformatics Data Visualization R
Training program teaching professionals how to create publication-quality graphics and interactive visualizations using R for environmental bioinformatics data.
3+WORKSHOPS
PROGRAMMES
Advanced ggplot2 for Genomic Data Visualization Interactive Environmental Data Dashboards with Shiny Metagenomic Abundance Visualization and Comparative Analysis +2 more programmes
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Cloud Computing Environmental Data Analysis
Intermediate workshop on leveraging cloud platforms and high-performance computing for large-scale environmental genomics analysis and storage.
3+WORKSHOPS
PROGRAMMES
AWS Lambda for Genomic Data Pipeline Automation Google Cloud BigQuery for Metagenomic Sequence Analysis Container Orchestration with Kubernetes for Bioinformatics Workflows +2 more programmes
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Functional Gene Profiling Analysis
Advanced training for bioinformaticians on identifying, annotating, and analyzing functional genes related to environmental processes like nutrient cycling.
3+WORKSHOPS
PROGRAMMES
Metagenomic Functional Annotation Pipeline Development Enzyme Kinetics Modeling in Environmental Microbial Communities Comparative Genomics for Functional Gene Discovery +2 more programmes
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Pathogen Detection Environmental Bioinformatics
Specialized course for public health and environmental professionals on detecting and identifying pathogenic organisms in water and environmental samples.
3+WORKSHOPS
PROGRAMMES
Metagenomic Sequencing Data Analysis Pipelines Real-time PCR and qPCR Assay Design Optimization Viral Genome Assembly and Consensus Calling +2 more programmes
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Viral Metagenomics Field to Analysis
Comprehensive training covering sample collection through bioinformatic analysis of viral sequences in environmental samples for epidemiologists and microbiologists.
3+WORKSHOPS
PROGRAMMES
High-Throughput Sequencing Data Quality Control and Trimming Viral Contig Assembly and Genome Reconstruction Workflows Taxonomic Classification and Viral Species Assignment Methods +2 more programmes
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Metaproteomics Data Analysis Workflow
Advanced workshop for biochemists and bioinformaticians on analyzing environmental protein sequences to understand microbial functional capabilities.
3+WORKSHOPS
PROGRAMMES
Spectral Library Construction and Peptide Identification Quantitative Proteomics Analysis Using MaxQuant and OpenMS Taxonomic and Functional Annotation of Metaproteomics Data +2 more programmes
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PCR Primer Design Environmental Targets
Technical training for laboratory technicians and researchers on designing optimal PCR primers for environmental DNA and target gene amplification.
3+WORKSHOPS
PROGRAMMES
Specificity Optimization for Environmental DNA Primers Multiplexing PCR Primer Strategies for Microbial Profiling Degenerate Primer Design for Pathogen Detection +2 more programmes
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Database Management Genomic Information
Intermediate training for IT professionals and bioinformaticians on setting up and maintaining databases for storing and querying environmental genomic data.
3+WORKSHOPS
PROGRAMMES
NoSQL Database Design for Metagenomic Datasets SQL Query Optimization in Genomic Data Warehouses Graph Database Implementation for Microbial Taxonomy Networks +2 more programmes
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Metagenome Assembly Troubleshooting
Advanced technical workshop teaching bioinformaticians how to troubleshoot common issues in metagenome assembly and optimize assembly parameters.
3+WORKSHOPS
PROGRAMMES
Diagnosing Assembly Graph Collapse and Chimera Detection Optimizing k-mer Selection for Metagenome Assembly Quality Coverage Mapping and Read Recruitment Troubleshooting +2 more programmes
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