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Genome Annotation Workshops

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Showing 13–24 of 50 categories
Non-coding RNA Annotation Techniques
Specialized workshop covering miRNA, lncRNA, and other non-coding RNA identification and characterization.
3+WORKSHOPS
PROGRAMMES
miRNA Target Prediction and Validation Workflows Long Non-coding RNA Structure Annotation Methods Small Nucleolar RNA Identification and Classification +2 more programmes
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Structural Variant Annotation Strategy
Advanced training on annotating large insertions, deletions, inversions, and other structural variations.
3+WORKSHOPS
PROGRAMMES
Structural Variant Detection and Calling Workflow SV Annotation Using VEP and AnnotSV Tools Breakpoint Resolution and SV Validation Techniques +2 more programmes
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Ortholog and Paralog Assignment
Intermediate training on identifying gene relationships across species for functional transfer and comparative annotation.
3+WORKSHOPS
PROGRAMMES
Ortholog Identification Using Sequence Homology Paralog Detection and Functional Divergence Analysis Gene Family Clustering for Ortholog Assignment +2 more programmes
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Manual Curation Best Practices
Professional development workshop on evidence gathering, decision-making, and documentation standards for curators.
3+WORKSHOPS
PROGRAMMES
Manual Gene Feature Curation Workflows Quality Control Standards for Genomic Annotation Evidence Integration for Variant Annotation Curation +2 more programmes
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Ensembl Annotation Database Platform
Software training on accessing, utilizing, and interpreting genome annotations from Ensembl resources.
3+WORKSHOPS
PROGRAMMES
Ensembl Database Navigation and Gene Queries Variant Effect Prediction Using Ensembl VEP Comparative Genomics and Ortholog Identification +2 more programmes
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NCBI GenBank Submission Protocol
Compliance training on preparing and submitting annotated sequences to public databases following NCBI standards.
3+WORKSHOPS
PROGRAMMES
GenBank Sequence Submission and Validation Feature Annotation for GenBank Records NCBI tbl2asn Automation and Error Resolution +2 more programmes
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High-Throughput Annotation Pipelines
Advanced training on automating genome annotation workflows using scripts, containers, and workflow management systems.
3+WORKSHOPS
PROGRAMMES
Automating Gene Structure Prediction Workflows High-Throughput Functional Annotation Integration RNA-Seq Evidence Mapping for Gene Models +2 more programmes
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Evidence Weighting and Data Integration
Intermediate workshop on combining multiple data sources including transcriptomics, proteomics, and homology evidence.
3+WORKSHOPS
PROGRAMMES
Evidence Quality Assessment for Genomic Data Integrating Multi-Source Annotation Data Pipelines Confidence Scoring Systems for Gene Structure Prediction +2 more programmes
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Genomic Coordinate System Operations
Technical training on understanding 0-based and 1-based coordinate systems and performing coordinate conversions.
3+WORKSHOPS
PROGRAMMES
GFF3 Format Parsing and Feature Extraction Coordinate Transformation Across Reference Genomes BED Format Operations and Region Merging +2 more programmes
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Metagenomic Assembly Annotation
Specialized training for annotating contigs and scaffolds from metagenomic projects with taxonomic assignment.
3+WORKSHOPS
PROGRAMMES
Functional Annotation Metagenomic Sequences Taxonomic Classification Assembled Metagenomes Gene Prediction Assembly Quality Control +2 more programmes
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Mammalian Genome Feature Annotation
Focused training on annotating complex mammalian genomes with emphasis on regulatory elements and pseudogenes.
3+WORKSHOPS
PROGRAMMES
Gene Structure Annotation Using RNA-Seq Data Regulatory Element Discovery and Classification Transposable Element Detection and Annotation +2 more programmes
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Plant Genome Annotation Specifics
Specialized workshop covering plant-specific features including alternative splicing, transposons, and polyploidy annotation.
3+WORKSHOPS
PROGRAMMES
Plant Gene Structure Prediction and Validation Transposable Element Detection in Crop Genomes Functional Annotation Using Orthology and Synteny +2 more programmes
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