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Genome Annotation Workshops

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Showing 37–48 of 50 categories
Chromatin Immunoprecipitation Data Integration
Intermediate training on incorporating ChIP-Seq data to improve regulatory element annotation accuracy.
3+WORKSHOPS
PROGRAMMES
ChIP-seq Data Quality Control and Preprocessing Peak Annotation and Genomic Feature Mapping Multi-sample ChIP-seq Comparative Analysis +2 more programmes
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Version Control for Annotation Projects
Technical training on using Git and version control systems to manage collaborative annotation updates.
3+WORKSHOPS
PROGRAMMES
Git Workflows for Genomic Annotation Teams Version Control Best Practices in Bioinformatics Managing Annotation Data with GitHub Actions +2 more programmes
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Pseudogene and Gene Fragment Identification
Advanced workshop on recognizing non-functional gene copies and incomplete gene structures.
3+WORKSHOPS
PROGRAMMES
Pseudogene Detection Using Sequence Alignment Tools Gene Fragment Curation and Annotation Workflows Identifying Processed Pseudogenes in Genomic Data +2 more programmes
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Genome Annotation Team Coordination
Professional development program for managing annotation teams, distributing work, and quality assurance.
3+WORKSHOPS
PROGRAMMES
Coordinating Multi-Team Genome Annotation Projects Quality Control Standards in Collaborative Annotation Pipeline Management for Genome Annotation Teams +2 more programmes
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AGAT Bioinformatics Toolkit Usage
Software-specific training on using AGAT tools for genome feature manipulation and validation.
3+WORKSHOPS
PROGRAMMES
AGAT Genome Feature Annotation Essentials Structural Variant Annotation Using AGAT GFF GTF File Processing and Manipulation +2 more programmes
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Viral Genome Annotation Approaches
Specialized training on annotating viral sequences with emphasis on overlapping genes and polyproteins.
3+WORKSHOPS
PROGRAMMES
Viral Genome Feature Prediction and Annotation RNA Secondary Structure Analysis for Viral Genomes Comparative Genomics and Viral Phylogenetic Annotation +2 more programmes
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Annotation Database Querying and Mining
Intermediate training on querying public databases like UniProt, PubMed, and specialized genomics databases.
3+WORKSHOPS
PROGRAMMES
Querying NCBI Databases for Genomic Annotation Mining Ensembl for Gene Structure and Variants UniProt Knowledge Base Search and Integration +2 more programmes
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Allele and Haplotype Annotation
Advanced training on annotating sequence variants and haplotypes at population genomics scale.
3+WORKSHOPS
PROGRAMMES
Functional Allele Classification and Annotation Pipelines Haplotype Block Definition and Population Stratification Phase-Based Variant Calling and Haplotype Assembly Techniques +2 more programmes
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Annotation Accuracy Metrics and Evaluation
Technical training on calculating sensitivity, specificity, and other metrics for annotation benchmark assessment.
3+WORKSHOPS
PROGRAMMES
Sensitivity Specificity Tradeoffs in Genomic Feature Prediction ROC Curve Analysis for Annotation Tool Benchmarking Quality Score Implementation and Confidence Assessment +2 more programmes
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Codon Usage and GC Content Analysis
Specialized workshop on using genomic composition patterns to detect horizontally transferred genes.
3+WORKSHOPS
PROGRAMMES
Codon Usage Bias Analysis in Genomic Sequences GC Content Profiling for Genome Quality Assessment Codon Optimization for Heterologous Protein Expression +2 more programmes
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Signal Peptide and Transmembrane Prediction
Intermediate training on predicting protein localization signals for subcellular location annotation.
3+WORKSHOPS
PROGRAMMES
Signal Peptide Prediction Using Bioinformatics Tools Transmembrane Domain Architecture Analysis and Annotation Comparative Topology Prediction Across Multiple Algorithms +2 more programmes
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De Novo Gene Prediction Validation
Advanced workshop on evaluating and refining ab initio gene predictions using multiple evidence types.
3+WORKSHOPS
PROGRAMMES
De Novo Gene Prediction Model Evaluation AUGUSTUS and SNAP Pipeline Optimization RNA-Seq Evidence Integration for Gene Calls +2 more programmes
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