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Genome Annotation Workshops

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Showing 25–36 of 50 categories
Fungal Genome Annotation Methods
Intermediate training on yeast and filamentous fungal genome annotation with practical case studies.
3+WORKSHOPS
PROGRAMMES
Automated Gene Prediction in Fungal Genomes RNA Seq Integration for Fungal Annotation Comparative Genomics Across Fungal Species +2 more programmes
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InterProScan Tool Configuration
Hands-on software training on setting up, running, and interpreting InterProScan for domain and motif annotation.
3+WORKSHOPS
PROGRAMMES
InterProScan Database Setup and Configuration Functional Protein Domain Prediction with InterProScan InterProScan Pipeline Automation and Parallelization +2 more programmes
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Genomic Feature Visualization Techniques
Training on creating publication-quality figures and visualizations of genomic annotations using specialized tools.
3+WORKSHOPS
PROGRAMMES
IGV Genome Browser Visualization and Analysis Circos Plot Design for Genomic Data Display Track Hub Construction for Genome Browsers +2 more programmes
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Regulatory Element Annotation Standards
Advanced training on identifying and annotating promoters, enhancers, silencers, and other regulatory sequences.
3+WORKSHOPS
PROGRAMMES
ENCODE Standards for Regulatory Element Annotation ChIP seq Peak Calling and Regulatory Region Mapping CpG Island Detection and Promoter Annotation Protocols +2 more programmes
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Sequence Alignment Interpretation
Intermediate workshop on reading and analyzing multiple sequence alignments for functional annotation.
3+WORKSHOPS
PROGRAMMES
BLAST Results Analysis and Homology Assessment Multiple Sequence Alignment Interpretation Techniques Domain Architecture Mapping from Alignment Data +2 more programmes
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Annotation Conflict Resolution Methods
Professional training on identifying and resolving disagreements between annotation tools and methodologies.
3+WORKSHOPS
PROGRAMMES
Resolving Overlapping Gene Predictions in Annotation Evidence Weighting for Conflicting Functional Annotations Consensus Building Across Multiple Annotation Pipelines +2 more programmes
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Genomic Nomenclature and Naming
Compliance training on gene naming conventions, HGNC standards, and maintaining annotation naming consistency.
3+WORKSHOPS
PROGRAMMES
HGNC Gene Symbol Standardization and Application Genomic Variant Classification and Nomenclature Protein Domain Naming and InterPro Annotation +2 more programmes
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Pathogenic Variant Annotation Protocol
Specialized training for clinical genomics professionals on annotating disease-causing variants.
3+WORKSHOPS
PROGRAMMES
Interpreting Pathogenic Variants Using ACMG Guidelines Functional Annotation of Disease Causing Mutations Clinical Report Writing for Genomic Findings +2 more programmes
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Machine Learning in Genome Annotation
Advanced training on applying neural networks and machine learning models to improve annotation accuracy.
3+WORKSHOPS
PROGRAMMES
Deep Learning for Gene Structure Prediction Transfer Learning Models for Variant Effect Prediction Sequence Classification with Convolutional Neural Networks +2 more programmes
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Synteny and Genomic Rearrangement Analysis
Intermediate workshop on analyzing conserved gene order and detecting large-scale genomic rearrangements.
3+WORKSHOPS
PROGRAMMES
Synteny Analysis Using Comparative Genomics Tools Detecting Chromosomal Rearrangements in Genome Sequences Genome Assembly Quality Assessment and Refinement +2 more programmes
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Mitochondrial and Chloroplast Annotation
Specialized training on annotating organellar genomes with unique features and compact gene organization.
3+WORKSHOPS
PROGRAMMES
Mitochondrial Genome Assembly and Quality Control Chloroplast Gene Prediction and Feature Annotation Organellar Genome Synteny Analysis and Comparison +2 more programmes
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Long-Read Sequencing Data Annotation
Advanced training on leveraging PacBio and Oxford Nanopore long-read data for improved structural annotation.
3+WORKSHOPS
PROGRAMMES
Basecalling and Quality Assessment for Long Reads Structural Variant Detection in Long Read Data Full Length Transcript Assembly and Isoform Annotation +2 more programmes
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